Deleterious effects of heavy metals on soil microorganisms are reviewed in relation to the complexities involved in their study. There is strong evidence that soil microbes are more sensitive to heavy metals than animals or crop plants. Decisions concerning limits considered to be ‘safe’ in terms of protection of soil microorganisms or soil microbial processes from metal toxicity depend on the organisms considered and value judgements as to their importance. At present there is a large discrepancy in actual concentrations of heavy metals that are allowed to accumulate in agricultural soils between different countries. The approach of attempting to achieve zero accumulation of heavy metals in soils is undoubtedly the most conservative, but will severely restrict the recycling of sewage sludges to agricultural land.