Electrostatic interactions in the assembly ofEscherichia coliaspartate transcarbamylase
作者:
M. P. Glackin,
M. P. McCarthy,
D. Mallikarachchi,
J. B. Matthew,
N. M. Allewell,
期刊:
Proteins: Structure, Function, and Bioinformatics
(WILEY Available online 1989)
卷期:
Volume 5,
issue 1
页码: 66-77
ISSN:0887-3585
年代: 1989
DOI:10.1002/prot.340050108
出版商: Wiley Subscription Services, Inc., A Wiley Company
关键词: subunit interactions;allosteric regulation;solvent accessibility
数据来源: WILEY
摘要:
AbstractAlthough ionizable groups are known to play important roles in the assembly, catalytic, and regulatory mechanisms ofEscherichia coliaspartate transcarbamylase, these groups have not been characterized in detail. We report the application of static accessibility modified Tanford‐Kirkwood theory to model electrostatic effects associated with the assembly of pair of chains, subunits, and the holoenzyme. All of the interchain interfaces except R1–R6 are stabilized by electrostatic interactions by −2 to −4 kcal−m−1at pH 8. The pH dependence of the electrostatic component of the free energy of stabilization ofintrasubunitcontacts (C1–C2 and R1–R6) is qualitatively different from that ofintersubunitcontacts (C1–C4, C1–R1, and C1–R4). This difference may allow the transmission of information across subunit interfaces to be selectively regulated. Groups whose calculated pK or charge changes as a result of protein‐protein interactions have been identified and the results correlated with available information about their function. Both the 240s loop of the c chain and the region near the Zn(II) ion of the r chain contain clusters of ionizable groups whose calculated pK values change by relatively large amounts upon assembly. These pK changes in turn extend to regions of the protein remote from the interface. The possibility that networks of ionizable groups are involved in transmitting information between bin
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