Computer building of β‐helical polypeptide models
作者:
Roger E. Koeppe,
Michio Kimura,
期刊:
Biopolymers
(WILEY Available online 1984)
卷期:
Volume 23,
issue 1
页码: 23-38
ISSN:0006-3525
年代: 1984
DOI:10.1002/bip.360230104
出版商: Wiley Subscription Services, Inc., A Wiley Company
数据来源: WILEY
摘要:
AbstractA general method is presented for computing the atomic coordinates of helices in which a dipeptide is the repeating unit. The method will generate both single‐ and double‐stranded model helices having idealized bond lengths and angles, and any arbitrary, user‐specified, pitch and number of residues per turn. The variation of inter‐ and intrastrand hydrogen bonds with pitch and number of residues per turn can thus be examined. An application of the method is the construction of a β‐helix having pitch of 6.3 Å per turn and 4.85 residues per turn, a model which can pack nicely into the unit cell of crystals of cation‐bound
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