Henderson Island, in the Pitcairn Group, preserves a Pleistocene atoll physiography with the rim of the raised reef structure, supporting spur and groove topography, enclosing a central lagoon. Excellent preservation of coral reef communities occurs along the ancient atoll rim and within the central lagoon. The previously interpreted depositional nature of the fossil atoll structure is herein corroborated with geomorphologic and stratigraphic evidence from previously un‐visited portions of the island. Stratigraphic and lateral facies relationships indicate a physiographic zonation which includes spur and grooves, outer reef flat, lagoon margin, and an interior lagoon with patch reefs. Thein situoccurrence and zonation of reef coral communities around the periphery and within the interior of the island appear to reflect the original physiography of the atoll lagoon, with the most pronounced reef development on the SE side of the original atoll. Stratigraphic units which comprise the raised atoll lagoon structure represent different time intervals, so the atoll lagoon structure formed during various sea level fluctuations. The modern atolls of the Pitcairn Group, Oeno and Ducie, provide some comparisons (similarities and differences) with the fossil lagoon on top of Henderson Islan