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Contrasting solution conformations of peptides containing α,α‐dialkylated residues with linear and cyclic side chains

 

作者: Sudhanand Prasad,   R. Balaji Rao,   P. Balaram,  

 

期刊: Biopolymers  (WILEY Available online 1995)
卷期: Volume 35, issue 1  

页码: 11-20

 

ISSN:0006-3525

 

年代: 1995

 

DOI:10.1002/bip.360350103

 

出版商: Wiley Subscription Services, Inc., A Wiley Company

 

数据来源: WILEY

 

摘要:

AbstractThe conformational properties of α,α‐dialkylated amino acid residues possessing acyclic (diethylglycine, Deg: di‐n‐propylglycine, Dpg; di‐n‐butylglycine, Dbg) and cyclic (1‐amino‐cycloalkane‐1‐carboxylic acid, Acnc) side chains have been compared in solution. The five peptides studied by nmr and CD spectroscopy are Boc‐Ala‐Xxx‐Ala‐OMe, where Xxx = Deg(I). Dpg (II), Dbg (III), Ac6c (IV), and Ac7c (V). Delineation of solvent‐shielded NH groups have been achieved by solvent and temperature dependence of NH chemical shifts in CDCl3and (CD3)2SO and by paramagnetic radical induced line broadening in pepiide III. In the Dxg peptides the order of solvent exposure of NH groups is Ala(1)>Ala(3)>Dxg(2), whereas in the Acnc peptides the order of solvent exposure of NH groups is Ala(1)>Acnc(2)>Ala(3). The nmr results suggest that Acnc peptides adopt folded β‐turn conformations with Ala(1) and Acnc(2) occupyingi+ 1 andi+ 2 positions. In contrast, the Dxg peptides favor extended C5conformations. The conformational differences in the two series are clearly borne out in CD studies. The solution conformations of peptides I‐III are distinctly different from the β‐turn structure observed in crystals. Low temperature nmr spectra recorded immediately after dissolution of crystals of peptide II provide evidence for a structural transition. Introduction of an additional hydrogen‐bonding function in Boc‐Ala‐Dpg‐Ala‐NHMe (VI) results in a stabilization of a consecutive β‐turn or incipient

 

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