This paper develops a hierarchical least square solution algorithm for highly nonlinear heat transfer problems. The methodology's capability is such that both steady and transient implicit formulations can be handled. This includes problems arising from highly nonlinear heat transfer systems modeled by either finite-element or finite-difference schemes. The overall procedure developed enables localized updating, iteration, and convergence checking as well as constraint application. The localized updating can be performed at a variety of hierarchical levels, i.e., degree of freedom, substructural, material-nonlinear groups, and/or boundary groups. The choice of such partitions can be made via energy partitioning or nonlinearity levels as well as by user selection. Overall, this leads to extremely robust computational characteristics. To demonstrate the methodology, problems are drawn from nonlinear heat conduction. These are used to quantify the robust capabilities of the hierarchical least square scheme.