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1. |
Detection of hidden structural rearrangements by fish in pleomorphic adenomas |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 81-86
Pelle Sahlin,
Joachim Mark,
Göran Stenman,
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摘要:
AbstractPrevious cytogenetic analysis of pleomorphic adenomas of the salivary glands has revealed a subgroup of tumors with interstitial deletions of 8q with breakpoints at q12 and q21–23. In this paper we have re‐examined four adenomas with confirmed or suspected deletions of 8q by FISH. Painting of interphase nuclei and metaphase chromosomes with whole chromosome libraries revealed that in each of the four cases the deleted chromosome 8 material was found inserted or translocated onto other chromosomes. In two of the cases we were also able to resolve several other complex rearrangements. Our FISH data thus suggest that gross deletions of 8q do not occur in pleomorphic adenomas. These observations are of crucial importance for the molecular interpretations of the 8q12 rearrangements. The fact that all rearrangements with breakpoints at 8q12 seem to be translocations or insertions strongly indicates that they involve a similar molecular mechanism. Our findings illustrate that chromosome painting is a valuable and useful adjunct to conventional cytogenetic analysis of solid tum
ISSN:1045-2257
DOI:10.1002/gcc.2870120202
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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2. |
Expression of the wilms' tumor geneWT1in human malignant mesothelioma cell lines and relationship to platelet‐derived growth factor A and insulin‐like growth factor 2 expression |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 87-96
Anthonie W. Langerak,
Kathleen A. Williamson,
Kiyoshi Miyagawa,
Anne Hagemeijer,
Marjan A. Versnel,
Nicholas D. Hastie,
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摘要:
AbstractMutations in theWT1tumor suppressor gene are known to contribute to the development of Wilms' tumor (WT) and associated gonadal abnormalities.WT1is expressed principally in the fetal kidney, developing gonads, and spleen and also in the mesothelium, which lines the coelomic cavities. These tissues develop from mesenchymal components that have subsequently become epithelialized, and it has therefore been proposed thatWT1may play a role in this transition of cell types. To test the possible involvement of this gene in malignant mesothelioma, we have first studied its expression in a panel of human normal and malignant mesothelial cell lines.WT1mRNA expression levels varied greatly between the cell lines and no specific chromosomal aberration on 11p, which could be related to the variation inWT1expression in these cell lines, was observed. Furthermore, no gross deletions, rearrangements, or functionally inactivating point mutations in theWT1coding region were identified. All fourWT1splice variants were observed at similar levels in these cell lines. TheWT1gene encodes a zinc‐finger transcription factor and the four protein isoforms are each believed to act as transcriptional repressors of certain growth factor genes. Lack ofWT1expression is thus predicted to result in growth stimulation of tumor cells. Binding of one particularWT1isoform construct to the insulin‐like growth factor 2 (IGF2) and platelet‐derived growth factor A (PDGFA) gene promoters has been demonstrated to result in repression of these genes in transient transfection studies. Analysis ofIGF2andPDGFAmRNA expression levels compared withWT1mRNA expression levels failed to demonstrate an inverse correlation in the mesothelial cell lines, which endogenously express these genes. Finally, the putative role ofWT1in the transition of cell types was investigated. No obvious correlation betweenWT1expression levels and cell morphology of the malignant mesothelial cell lines was evident from this study. Moreover, no change inWT1expression was observed in normal mesothelial cells which were, by alteration of culture conditions, manipulated to switch from the mesenchymal to epithelial morph
ISSN:1045-2257
DOI:10.1002/gcc.2870120203
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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3. |
Karyotypic characterization of colorectal adenocarcinomas |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 97-109
Georgia Bardi,
Tatiana Sukhikh,
Nikos Pandis,
Claus Fenger,
Ole Kronborg,
Sverre Heim,
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摘要:
AbstractCytogenetic analysis of short‐term cultures from 52 primary colorectal adenocarcinomas revealed clonal chromosome aberrations in 45 tumors, whereas the remaining 7 had a normal karyotype. More than 1 abnormal clone was detected in 26 tumors; in 18 of them, the clones were cytogenetically unrelated. The modal chromosome number was near‐diploid in 32 tumors and near‐triploid to near‐tetraploid in 13. Only numerical aberrations were identified in 13 carcinomas, only structural aberrations in 3, and 29 had both numerical and structural changes. The most common numerical abnormalities were, in order of decreasing frequency, gains of chromosomes 7, 13, 20, and Y and losses of chromosomes 18, Y, 14, and 15. The structural changes most often affected chromosomes 1, 17, 8, 7, and 13. The most frequently rearranged chromosome bands were, in order of decreasing frequency, 13q10, 17p10, 1p22, 8q10, 17p11, 7q11, 1p33, 7p22, 7q32, 12q24, 16p13, and 19p13. Frequently recurring aberrations affecting these bands were del(1)(p22), i(8)(q10), i(13)(q10), and add(17)(p11–13). The most common partial gains were from chromosome arms 8q, 13q, and 17q and the most common partial losses from chromosome arms 1p, 8p, 13p, and 17p. A correlation analysis between the karyotype and the clinicopathologic features in our total material, which consists of altogether 153 colorectal carcinomas, including 116 with an abnormal karyotype, showed a statistically significant association (P<0.05) between the karyotype and tumor grade and site. Carcinomas with structural chromosome rearrangements were often poorly differentiated; well and moderately differentiated tumors often had only numerical aberrations or normal karyotypes. Abnormal karyotypes were more common in rectal carcinomas than in carcinomas situated higher up. Near‐triploid to near‐tetraploid karyotypes were more than twice as frequent in tumors of the distal colon as in those of the proximal colon and rectum. The cytogenetic data indicate that carcinomas located in the proximal colon and rectum, which often are near‐diploid with simple numerical changes and cytogenetically unrelated clones, probably arise through different mechanisms than do tumors located in the distal colon, which more often have complex near‐triploid to near‐te
ISSN:1045-2257
DOI:10.1002/gcc.2870120204
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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4. |
N‐ andKRASmutations in primary testicular germ cell tumors: Incidence and possible biological implications |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 110-116
Robert A. Olie,
Leendert H. J. Looijenga,
Lucie Boerrigter,
Bert Top,
Sjoerd Rodenhuis,
An Langeveld,
Maarten P. Mulder,
J. Wolter Oosterhuis,
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摘要:
AbstractRecently, conflicting results have been reported on the incidence ofRASmutations in primary testicular germ cell tumors of adults (TGCTs). In four studies a low incidence of mutations (less than 15%) in a variety of TGCTs or derived cell lines was found, whereas in two other studies a high incidence ofN‐ orKRASmutations (over 40%) was shown. A total of 62 testicular seminomas (SE) and 34 nonseminomatous TGCTs (NS) were studied thus far. The largest series consisted of 42 TGCTs, studied on paraffin embedded tissue. We present the results of analysis for the presence ofN‐ andKRASmutations, in codons 12, 13, and 61, in snap frozen samples of 100 primary TGCTs, comprising 40 SE and 60 NS. Using the polymerase chain reaction (PCR) and allele specific oligonucleotide hybridization (ASO), mutations were found in five SE (three inNRASand two inKRAS, all codon 12), and in one NS (KRAS, codon 12). To exclude underestimation of the incidence ofRASmutations in TGCTs due to the presence of an excess of wild type alleles in the analyzed sample, a PCR technique preferentially amplifyingKRASalleles with a mutation in codon 12 was applied to all SE. This approach, allowing a 250 times more sensitive assay, resulted in the detection of only one additional SE with a mutation. Based on a critical analysis of published data and on our results from the largest series of frozen samples investigated thus far, we conclude thatN‐ orKRASmutations are rare and apparently not essential for initiation or progression of
ISSN:1045-2257
DOI:10.1002/gcc.2870120205
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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5. |
Screening for germ‐line mutations in theNF2Gene |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 117-127
Philippe Mérel,
Khé Hoang‐Xuan,
Marc Sanson,
Emilia Bijlsma,
Guy Rouleau,
Pierre Laurent‐Puig,
Stephan Pulst,
Michael Baser,
Gilbert Lenoir,
Jean Marc Sterkers,
Jacques Philippon,
François Resche,
Victor F. Mautner,
Georges Fischer,
Theo Hulsebos,
Alain Aurias,
Olivier Delattre,
Gilles Thomas,
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摘要:
AbstractNeurofibromatosis type 2 (NF2) is a monogenic dominantly inherited disease that predisposes to the development of tumors of the nervous system, particularly meningiomas and schwannomas. The gene which, when altered, causes NF2, is localized on chromosome 22 and has recently been identified. TheNF2gene is also the site of somatic mutation in tumors, suggesting that it might have a tumor suppressor activity. We here report a screening method for the detection of point mutations inNF2which takes advantage of denaturing gradient gel electrophoresis (DGGE). This method efficiently screens 95% of the coding sequence and 90% of intron/exon junctions. When applied to 91 unrelated NF2 patients, it enabled the identification of 32 germ‐line mutations. Since mutations are found in only one third of the patients, it is expected that mutations or deletions affecting the promoter and/or intronic regions of theNF2gene occur frequently. The characterized mutations are preferentially located within the 5° half of the gene. Most of them are predicted to lead to the synthesis of a truncated protein. A search for genotype/phenotype correlations showed that, at least in this series of patients, mild manifestations of the disease were associated with mutations which preserve the C‐terminal end of the pro
ISSN:1045-2257
DOI:10.1002/gcc.2870120206
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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6. |
11q13 Amplification in local recurrence of human primary breast cancer |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 128-133
Marie‐Hélène Champème,
Ivan Bièche,
Sarab Lizard,
Rosette Lidereau,
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摘要:
AbstractBreast cancer can relapse both locally and at distant metastatic sites. The mechanism of Iocal recurrence is unknown, but seems to be due not only to the number of residual cancer cells (inadequate irradiation or surgery), but also to their genetically determined malignant potential. To identify genetic alterations associated with local recurrence risk in breast carcinoma, we analyzed 28 local recurrences and 173 primary breast tumors for the ten most frequently altered genetic regions in breast carcinomas, i.e., loss of heterozygosity on chromosomal arms 1p, 3p, 7q, 11p, 17p, 17q, and 18q, and amplification of theMYCandERBB2protooncogenes and of genes in 11q13. OnlyINT2/FGF3andCCND1, located in 11q13, were more frequently amplified in local recurrences than in primary tumors (39% vs. 17%;P<0.01). Moreover, recurrence‐free survival was shorter when the 11q13 region was amplified. These results suggest that one or more genes located in 11q13 play an important role in local relapses of breast cance
ISSN:1045-2257
DOI:10.1002/gcc.2870120207
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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7. |
A genetic model of melanoma tumorigenesis based on allelic losses |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 134-141
Graeme J. Walker,
Jane M. Palmer,
Marilyn K. Walters,
Nicholas K. Hayward,
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摘要:
AbstractPrevious karyotypic studies have indicated a possible series of non‐random chromosomal events involved in progression of melanoma. We sought to verify and augment this model of melanocyte tumorigenesis by studying allelic deletions of markers mapping to these regions in 30 matched pairs of melanoma and constitutional DNA samples. Polymorphic loci on chromosomes 1, 7, 10, 11, 17, and 21 were analyzed and data combined with those previously obtained for chromosome arms 6q and 9p in the same series of tumours. The most frequent and earliest deletions were found on 9p (57%) and 10q (32%). With the exception of one case, no sample had loss of markers on another chromosome without concomitant loss of markers on 9p or 10q. Losses on 6q were also a frequent (31%) and early event whereas losses of loci on distal 1p (22%) or 11q (26%) occurred only in metastatic melanomas. A “background” rate (0–17%) of allele loss was seen on chromosomes 7, 17, and 21. These data strongly support the previous model based on karyotypic findings in melanocytic lesions. However, we have been able to further augment that model by delimiting the regions of loss on 10q, to that distal to D10S254, and on 1p, to between D1S243 and
ISSN:1045-2257
DOI:10.1002/gcc.2870120208
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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8. |
Atypical cytogenetic aberrations in two childhood peripheral primitive neuroectodermal Tumors |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 142-147
Jeffrey C. Murray,
Claire Langston,
Zoann E. Dreyer,
Charles T. Stephenson,
William J. Pokorny,
Marc E. Horowitz,
Linda D. Cooley,
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摘要:
AbstractAtypical cytogenetic abnormalities were detected in peripheral primitive neuroectodermal tumors (PPNET) of the extremity in two children. One had an osseous tumor with a balanced reciprocal translocation, t(5;9)(q22;q32), and had a complete response to therapy. The other had a non‐osseous tumor with an interstitial deletion, del(18)(q12.2q21.2), was resistant to combination therapy, and at autopsy had evidence of possible clonal evolution with the karyotype 46,XX der(8)t (8;8)(p11.2;q13), inv(16)(p13.2q12), del(18)(q12.2q21.2). Neither tumor demonstrated the t(11;22)(q24;q12) typically found in Ewing's sarcoma and PPNET, suggesting heterogeneity of the cytogenetic aberrations seen in this rare childhood malignanc
ISSN:1045-2257
DOI:10.1002/gcc.2870120209
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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9. |
Translocation t(8;13)(p11;q11‐12) in stem cell leukemia/lymphoma of t‐cell and myeloid lineages |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 148-151
Rizwan Naeem,
Samuel Singer,
Jonathan A. Fletcher,
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摘要:
AbstractAn unusual hematologic neoplasia has been described recently in which the predominant clinical features include T‐cell lymphoma, myeloid hyperplasia, and eosinophilia. The multilineage involvement in this disorder suggests transformation of a primitive stem cell. Abnormal karyotypes have been described in three such cases, including one case with t(8;13)(p11.2;q12) and a second case with t(8;13)(p23;q14). We report translocation of chromosomes 8 and 13 in lymph node karyotypes from two patients with this syndrome. Fluorescence in situ hybridization confirmed an identical translocation, t(8;13)(p11;q11‐12), in lymphoma cells from each patient. The translocation breakpoints are of particular interest because theFLT3receptor tyrosine kinase gene has been mapped to 13q12.FLT3is expressed highly in hematopoietic progenitor cells and in myeloid and lymphoid acute leukem
ISSN:1045-2257
DOI:10.1002/gcc.2870120210
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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10. |
Loss of heterozygosity in sporadic primary cutaneous melanoma |
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Genes, Chromosomes and Cancer,
Volume 12,
Issue 2,
1995,
Page 152-156
Eugene Healy,
Ishtiaq Rehman,
Brian Angus,
Jonathan L. Rees,
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摘要:
AbstractDifficulties in obtaining clinical samples from primary melanomas have meant that most genetic analyses of melanoma have concentrated on cell lines and metastases. Because the Breslow thickness of the primary tumour is the single best prognostic indicator, it is important to identify genetic abnormalities in primary melanomas and relate these changes to the thickness of the lesion. We have investigated 47 sporadic melanomas, of which 41 were primary lesions, for loss of heterozygosity (LOH) on several chromosomal arms, including areas where genes involved in familial melanoma and other relevant hereditary syndromes map, and where LOH has previously been reported in cell lines or metastatic lesions. LOH was identified at 66 (18%) of 358 informative loci in primary melanomas, and there was a significant relationship between the overall frequency of LOH and Breslow thickness (P<0.0005). Loss of chromosome arm 9p was most frequent, occurring in 15 (47%) of 32 informative primary tumours, and was observed in 3 of 11 informative lesions ≦ 1.5 mm in depth. LOH on chromosome arms 3p, 6q, 10q, 11q, and 17p was also relatively frequent, with loss of 3p and 10q heterozygosity in lesions ≦ 1.5 mm in depth, while LOH on 6q, 11q, and 17p was only detected in more invasive tumours. The results suggest that loss of these chromosome regions are important in sporadic cutaneous melanoma, and are consistent with chromosome arm 9p loss occurring before loss of other chromosome a
ISSN:1045-2257
DOI:10.1002/gcc.2870120211
出版商:Wiley Subscription Services, Inc., A Wiley Company
年代:1995
数据来源: WILEY
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