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1. |
Conformational constraints in angiotensin IV to probe the role of Tyr2, Pro5and Phe6 |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 545-553
Aneta Lukaszuk,
Heidi Demaegdt,
Isabelle Van den Eynde,
Patrick Vanderheyden,
Georges Vauquelin,
Dirk Tourwé,
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摘要:
AbstractThe aromatic amino acids Tyr and Phe in angiotensin IV (Ang IV) were conformationally constrained by the use of β‐Me substituted analogs, or cyclic constrained analogs. None of these modifications was allowed for Tyr1, while onlye‐β‐MePhe6substitution resulted in an AngIV analog with high IRAP potency and selectivityversusAP‐N or the AT1receptor. This indicates an important role of the orientation of the Phe6for inducing selectivity. Pro5replacement with 2‐aminocyclopentanecarboxylic acid maintained IRAP potency and abolished AT1affinity. These results confirm the importance of conformational constrained amino acids to generate selectivity in bioactive peptides. Copyright © 2011 European Peptide Society and John Wil
ISSN:1075-2617
DOI:10.1002/psc.1365
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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2. |
Molecular modeling study of the opioid receptor interactions with series of cyclic deltorphin analogues |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 554-564
Magdalena J. Ślusarz,
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摘要:
AbstractIn this study, ten tetra‐ and heptapeptide analogues of deltorphin containing the urea bridges between residues 2 and 4 have been docked into the δ‐ and µ‐opioid receptors to explain their different biological activities. The important factors explaining particular ligand activity such as free energy of binding, conformation of the ligand, its location inside the binding pocket as well as the number and strength of the receptor–ligand interactions have been discussed. Several different binding modes for investigated ligands have been proposed. It appears that the binding site is not identical even for very similar ligands. Results of this study help to explain the differences in biological activity of the deltorphin analogues, their interaction with the opioid receptors at the molecular level and support designing a new generation of potent opioid drugs with improved selectivity. Copyright © 2011 European Peptide Society and John Wiley
ISSN:1075-2617
DOI:10.1002/psc.1371
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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3. |
Selection and characterization of a 7‐mer peptide binding to divalent cations |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 565-568
Daeyoung Han,
Seong Huh,
Heejoon Myung,
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摘要:
AbstractA 7‐mer peptide (S‐T‐L‐P‐L‐P‐P) that bound to various divalent cations was selected from a phage display peptide library. Isothermal calorimetric analysis revealed that the peptide bound to Pb2+, Cd2+, Hg2+, and Cu2+. Through the use of CD studies, no secondary structural changes were observed for the peptide upon binding to divalent cations. Ala scanning mutant peptides bound to Hg2+with a reduced affinity. However, no single substitution was shown to affect the overall affinity. We suggest that Pro residues chelate divalent cations, while the structure formed by the peptide is also important for the binding process. Copyright © 2011 European Peptide Society and John W
ISSN:1075-2617
DOI:10.1002/psc.1374
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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4. |
Development of [Ile40]HTLV‐I protease inhibition assay using novel fluorogenic and chromogenic substrate |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 569-575
Henri‐Obadja Kumada,
Jeffrey‐Tri Nguyen,
Taeko Kakizawa,
Koushi Hidaka,
Tooru Kimura,
Yoshio Hayashi,
Yoshiaki Kiso,
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摘要:
AbstractHTLV‐I is a debilitating and/or lethal retrovirus that causes HTLV‐I‐associated myelopathy/tropical spastic paraparesis, adult T‐cell leukemia and several inflammatory diseases. HTLV‐I protease is an aspartic retropepsin involved in HTLV‐I replication and its inhibition could treatHTLV‐I infection. A recombinant L40I mutant HTLV‐I protease was designed and obtained fromEscherichia coli, self‐processingand purification by ion‐exchange chromatography. The protease was refolded by a one‐step dialysis and recovered activity. The cleavage efficiency of the [Ile40]HTLV‐I protease was at least 300 times higher for a fluorescent substratethan that of our previously reported recombinant His‐tagged non‐mutated HTLV‐I protease. In addition, we designed and synthesized a substrate containing a highly fluorescent Mca moiety in the fragment before the scissile bond, and a chromogenicp‐nitrophenylalanine moiety after the scissile bond that greatly amplified spectrometry detection and improved the HTLV‐I protease inhibition potency assay. The HTLV‐I protease inhibition assay with the [Ile40]HTLV‐I protease and fluorogenic substrate requires distinctively less protease, substrate, inhibitor and assay time than our previous methods. This means our new assay is more cost‐effective and more time‐efficient while being reproducible and less labor‐intensive. Copyright © 2011 Europ
ISSN:1075-2617
DOI:10.1002/psc.1375
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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5. |
An improved synthesis of (2S, 4S)‐ and (2S, 4R)‐2‐amino‐4‐methyldecanoic acids: assignment of the stereochemistry of culicinins |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 576-580
Wei Zhang,
Ning Ding,
Yingxia Li,
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摘要:
AbstractAn improved synthesis of (2S, 4S)‐ and (2S, 4R)‐2‐amino‐4‐methyldecanoic acids was accomplished using a glutamate derivative as starting material and Evans' asymmetric alkylation as the decisive step. The NMR data of the two diastereomers were measured and compared with those of the natural product. As a result, the stereochemistry of this novel amino acid unit in culicinins was assigned as (2S, 4R). Copyright © 2011 European Peptide Society and John Wiley
ISSN:1075-2617
DOI:10.1002/psc.1376
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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6. |
Synthetic studies toward labionin, a new α,α‐disubstituted amino acid from type III lantibiotic labyrinthopeptin A2 |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 581-584
Georg M. Sambeth,
Roderich D. Süssmuth,
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摘要:
AbstractThe labyrinthopeptins are a new class of lantibiotics containing two identical quaternary α,α‐disubstituted amino acids, named labionin (Lab). The synthetic formation of this unique structural feature represents the key step in the total synthesis of these polycyclic peptides. In this report we describe the synthesis of an orthogonally protected α,α‐disubstituted amino acid building block serving as labionin precursor for the future assembly of labyrinthopeptin A2 and of other labyrinthopeptin derivatives. Copyright © 2011 European Peptide Society and John Wiley&S
ISSN:1075-2617
DOI:10.1002/psc.1378
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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7. |
Synthesis, preferred conformation, protease stability, and membrane activity of heptaibin, a medium‐length peptaibiotic |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 585-594
Marta De Zotti,
Barbara Biondi,
Cristina Peggion,
Yoonkyung Park,
Kyung‐Soo Hahm,
Fernando Formaggio,
Claudio Toniolo,
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摘要:
AbstractThe medium‐length peptaibiotics are characterized by a primary structure of 14–16 amino acid residues. Despite the interesting antibiotic and antifungal properties exhibited by these membrane‐active peptides, their exact mechanism of action is still unknown. Here, we present our results on heptaibin, a 14‐amino acid peptaibiotic found to exhibit antimicrobial activity againstStaphylococcus aureus. We carried out the very challenging synthesis of heptaibin on solid phase and a detailed conformational analysis in solution. The peptaibiotic is folded in a mixed 310‐/α‐helix conformation which exhibits a remarkable amphiphilic character. We also find that it is highly stable toward degradation by proteolytic enzymes and nonhemolytic. Finally, fluorescence leakage experiments using small unilamellar vesicles of three different compositions revealed that heptaibin, although uncharged, is a selective compound for permeabilization of model membranes mimicking the overall negatively charged surface of Gram‐positive bacteria. This latter finding is in agreement with the originally published antimicrobial activity data. Copyright © 2011 European Peptide Society and John
ISSN:1075-2617
DOI:10.1002/psc.1364
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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8. |
Increasing the hydrolysis constant of the reactive site upon introduction of an engineered Cys14Cys39bond into the ovomucoid third domain from silver pheasant |
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Journal of Peptide Science,
Volume 17,
Issue 8,
2011,
Page 595-600
Hikaru Hemmi,
Takashi Kumazaki,
Shuichi Kojima,
Takuya Yoshida,
Tadayasu Ohkubo,
Hideyoshi Yokosawa,
Kin‐ichiro Miura,
Yuji Kobayashi,
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摘要:
AbstractP14C/N39C is the disulfide variant of the ovomucoid third domain from silver pheasant (OMSVP3) introducing an engineered Cys14Cys39bond near the reactive site on the basis of the sequence homology between OMSVP3 and ascidian trypsin inhibitor. This variant exhibits a narrower inhibitory specificity. We have examined the effects of introducing a Cys14Cys39bond into the flexible N‐terminal loop of OMSVP3 on the thermodynamics of the reactive site peptide bond hydrolysis, as well as the thermal stability of reactive site intact inhibitors. P14C/N39C can be selectively cleaved byStreptomyces griseusprotease B at the reactive site of OMSVP3 to form a reactive site modified inhibitor. The conversion rate of intact to modified P14C/N39C is much faster than that for wild type under any pH condition. The pH‐independent hydrolysis constant (Khyd°) is estimated to be approximately 5.5 for P14C/N39C, which is higher than the value of 1.6 for natural OMSVP3. The reactive site modified form of P14C/N39C is thermodynamically more stable than the intact one. Thermal denaturation experiments using intact inhibitors show that the temperature at the midpoint of unfolding at pH 2.0 is 59 °C for P14C/N39C and 58 °C for wild type. There have been no examples, except P14C/N39C, where introducing an engineered disulfide causes a significant increase inKhyd°, but has no effect on the thermal stability. The site‐specific disulfide introduction into the flexible N‐terminal loop of natural Kazal‐type inhibitors would be useful to further characterize the thermodynamics of the reactive site peptide bond hydrolysis. Copyright © 2011 European Peptide Society and Jo
ISSN:1075-2617
DOI:10.1002/psc.1381
出版商:John Wiley&Sons, Ltd.
年代:2011
数据来源: WILEY
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